MSOne: Automated Metabolomics Data Analysis
Transform raw LC-MS data into actionable results in hours, not weeks. MSOne uses AI-powered workflows to streamline your metabolomics analysis—making it faster, clearer, and easier than ever.
Cumbersome data interpretation
Complex installation and steep learning curve
Format friction and poor scalability
Automated data processing
MSOne automates the entire workflow, drastically reducing human intervention and turnaround time.
Cleaner data
Raw LC-MS data is often dominated by noise and artifacts. MSOne achieves >90% noise reduction, revealing more true biological features for downstream analysis.
Integrated analytics
MSOne platform offers a unified, end-to-end solution while allowing individual modules to be used independently, seamlessly fitting into diverse analytical workflows
Built-in statistics and reports
MSOne bundles varied statistical analyses with automated generation of exportable figures and reports.
Cloud-based and user-friendly
MSOne entirely runs on a browser interface; designed for teams without coding expertise.
Vendor-agnostic support
MSOne supports open mzML file format with unified metadata mapping, and facilitates processing of large studies in a single run.
Discover our comprehensive suite of applications designed to meet the needs of metabolomics researchers. From raw data visualization to advanced statistical analysis, our AI-powered platform empowers you to make meaningful discoveries at every stage of your research.
MetaExplorer
Interactive Raw Data Visualization
Import your LC/MS raw data files and visualize, interact and analyze your raw LC/MS data. Perform data quality assessment and parameter estimation.
Instant Insights:
Dive into raw data files enriched with properties and metadata
Quality at a glance:
Plot TICs to quickly spot data acquisition issues
Smarter decisions:
Use 3D plots to uncover trends and optimize parameters
Improve accuracy:
Refine m/z and RT through side-by-side XIC comparisons
Engaging visuals:
Experience interactive plots that bring complex data to life
MetAnalyzer
Data Preprocessing and Annotation
Process your data using AI-assisted peak picking, deconvolution, RT alignment, noise removal, and isotope/adduct consolidation. Feature annotation with MS2 data against open-source and proprietary spectral libraries.
Broad file support
Handle raw .d, .mzML, and .mzXML, in both profile and centroid modes
Cleaner data, faster
Remove spectral and chromatographic noise with advanced neural networks
Smarter analysis
Leverage AI and graph-theory algorithms for precise RT alignment and peak grouping
Built for scale
Process 1,000s+ files in a single dataset with accuracy and speed
Visual clarity
Explore processed results with interactive plots and intuitive filters
MetaStat
Statistical Analysis & Visualization
Built-in univariate and multivariate analyses, biomarker ranking, pathway enrichment, and interactive dashboards with exportable publication-ready figures and tables.
Reliable results
Perform batch correction and streamlined data processing
Powerful visuals
Explore insights with heatmaps, volcano plots, violin plots, box-whisker plots, and more
In-depth statistics
All common tests like T-test for precise feature evaluation
Advanced multivariate tools
Uncover patterns with PCA, PLS-DA, OPLS-DA, SPLS-DA, and beyond
AI-driven discovery
Identify key biomarkers through machine-learning powered feature selection
MetaMine
Processed Public Dataset Repository
Curated repository of public datasets mined and reanalyzed with MSOne. Start exploring the platform directly with these demo datasets!
Access made easy
Tap into a curated pool of 80+ public-domain studies from MetaboLights, Metabolomics Workbench, Zenodo, and more
Cross-study insights
Compare and visualize processed data across multiple studies of the same type
Smarter planning
Design accurate experiments guided by previously published results
Actionable reports
Consume readymade summaries distilled from multiple relevant studies
Zero setup hassle
Explore and interpret public data without the burden of preprocessing
Choose MSOne to analyze your metabolomics data
15,000+
Files analyzed
200+
Active users
>80
Manhours saved per analysis
80+
Public datasets in MetaMine
500+
Metabolites Annotated
17
Completed Projects
15,000+
Files analyzed
200+
Active users
>80
Manhours saved per analysis
80+
Public datasets in MetaMine
500+
Metabolites Annotated
17
Completed Projects
FAQs
MSOne is designed for comprehensive LC-MS (liquid chromatography–mass spectrometry) metabolomics datasets, enabling seamless import, analysis, and visualization of complex multi-dimensional data.
All user data on MSOne is handled according to strict privacy protocols, with secure cloud infrastructure, encrypted storage, and strong access controls—ensuring your results stay confidential and protected.
Yes! MSOne includes automated modules for robust statistical analysis, customizable reporting, and high-quality visualizations, making it easy to generate publication-ready outputs directly from your datasets.
Absolutely. MSOne blends automated AI-powered processing with expert support, so you can contact our scientific team for personalized guidance or troubleshooting whenever you need it.
MSOne unifies data curation, analysis, pathway discovery, and interactive exploration in a single streamlined platform—accelerating your workflow with AI automation, eliminating tool silos, and delivering actionable, expert-validated insights for every level of researcher.
AI-enhanced algorithms for true peak detection and reliability
Modular pipeline: use any or all of MetaExplorer, MetAnalyzer, and MetaStat
Cloud-native: No installation, accessible anywhere
Scientifically validated: Designed around real-world challenges
End-to-end processing: Start from Raw data till statistical analysis
Integrated consulting: Interpretation support available from Clarity experts